Generates the reverse krsa plot (to examine kinase activity) — krsa_reverse_krsa_plot • KRSA

This function takes in chipCov df, the LFC table, kinases, LFC threshold, and generates the reverse krsa plot (to examine kinase activity)

Usage

krsa_reverse_krsa_plot(
  chipCov,
  lfc_table,
  kinases,
  lfc_thr,
  byChip = T,
  facet = F
)

Arguments

chipCov: chipCov df for eaither STK or PTK
lfc_table: the LFC table
kinases: vector of kinases
lfc_thr: LFC threshold
byChip: will facet by Barcode
facet: facet by chip

Value

ggplot object

See also

Other plots: krsa_ball_model(), krsa_coverage_plot(), krsa_curve_plot(), krsa_cv_plot(), krsa_heatmap(), krsa_heatmap_grouped(), krsa_histogram_plot(), krsa_violin_plot(), krsa_violin_plot_grouped(), krsa_waterfall(), krsa_zscores_plot()

Examples

TRUE
#> [1] TRUE